STRINGSTRING
R2601_22077 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22077" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22077Uncharacterized protein (502 aa)    
Predicted Functional Partners:
R2601_22072
Uncharacterized protein (179 aa)
   
  0.987
R2601_22082
Uncharacterized protein (169 aa)
 
   
  0.973
R2601_22062
Probable ClpA/B-type protease (914 aa)
 
 
  0.967
R2601_22067
Uncharacterized protein (382 aa)
 
   
  0.965
R2601_16105
Uncharacterized protein (169 aa)
   
  0.955
R2601_16070
Probable ClpA/B-type chaperone (889 aa)
 
 
  0.950
R2601_22092
Uncharacterized protein (625 aa)
 
   
  0.950
R2601_22097
Uncharacterized protein (354 aa)
 
   
  0.947
R2601_22087
Uncharacterized protein (217 aa)
 
   
  0.945
R2601_22122
Uncharacterized protein (1184 aa)
 
   
  0.944
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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