STRINGSTRING
R2601_22247 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22247" - Putative altronate dehydrogenase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
R2601_22247Putative altronate dehydrogenase (368 aa)    
Predicted Functional Partners:
R2601_22252
Altronate hydrolase (498 aa)
 
   
  0.994
uxuA
D-mannonate hydro-lyase ; Catalyzes the dehydration of D-mannonate (404 aa)
 
 
  0.990
R2601_22242
Putative Zn-dependent dehydrogenase (334 aa)
 
   
  0.966
kduI
DKI isomerase ; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (375 aa)
 
     
  0.855
R2601_04743
Mannose-6-phosphate isomerase, type II (477 aa)
         
  0.812
R2601_22681
2-dehydro-3-deoxygluconokinase (308 aa)
 
   
  0.788
R2601_16932
Putative Fructokinase (299 aa)
       
  0.787
R2601_17097
Xylulokinase (483 aa)
 
 
  0.740
R2601_02638
Putative L-xylulose kinase protein (512 aa)
 
 
  0.735
R2601_22227
TRAP-T family transporter, periplasmic binding protein, DctP (324 aa)
 
          0.728
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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