STRINGSTRING
R2601_22252 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22252" - Altronate hydrolase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22252Altronate hydrolase (498 aa)    
Predicted Functional Partners:
R2601_22247
Putative altronate dehydrogenase (368 aa)
 
   
  0.994
R2601_03218
Putative 5-dehydro-4-deoxyglucarate dehydratase (155 aa)
 
 
  0.987
R2601_00985
D-mannonate oxidoreductase (486 aa)
 
   
  0.944
uxuA
D-mannonate hydro-lyase ; Catalyzes the dehydration of D-mannonate (404 aa)
 
   
  0.941
R2601_26546
Mannitol dehydrogenase (497 aa)
 
   
  0.922
R2601_22681
2-dehydro-3-deoxygluconokinase (308 aa)
 
   
  0.921
R2601_22242
Putative Zn-dependent dehydrogenase (334 aa)
 
     
  0.919
R2601_03208
Uncharacterized protein (378 aa)
 
 
  0.885
R2601_03288
2-deoxy-D-gluconate 3-dehydrogenase (247 aa)
 
   
  0.884
kduI
DKI isomerase ; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (375 aa)
 
     
  0.838
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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