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R2601_22302 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22302" - Putative Acetoin utilization protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
R2601_22302Putative Acetoin utilization protein (368 aa)    
Predicted Functional Partners:
R2601_19180
NAD-dependent deacetylase (229 aa)
   
  0.718
R2601_19624
Possible ATP-dependent RNA helicase (156 aa)
     
  0.717
R2601_19619
Possible ATP-dependent RNA helicase (978 aa)
     
  0.717
mutS
DNA mismatch repair protein MutS ; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (874 aa)
   
      0.668
R2601_00910
Ribose-5-phosphate isomerase B (153 aa)
       
    0.634
R2601_22297
Putative ammonia monooxygenase (350 aa)
              0.628
R2601_17379
CbbX protein (310 aa)
   
    0.583
R2601_05063
WD domain/cytochrome c family protein (436 aa)
     
  0.578
gyrA
DNA gyrase subunit A ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (905 aa)
   
      0.557
parC
Topoisomerase IV subunit A ; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule (807 aa)
   
      0.557
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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