STRINGSTRING
R2601_22307 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22307" - Uncharacterized protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22307Uncharacterized protein (224 aa)    
Predicted Functional Partners:
R2601_13614
EpsK domain protein (525 aa)
   
          0.721
R2601_08026
Uncharacterized protein (178 aa)
   
          0.717
R2601_15532
Core-2/I-branching enzyme family protein (566 aa)
   
          0.707
glmU
Bifunctional protein GlmU ; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain (449 aa)
              0.706
glmS
L-glutamine--D-fructose-6-phosphate amidotransferase ; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (605 aa)
              0.706
R2601_08686
Uncharacterized protein (116 aa)
   
          0.694
R2601_24694
TfoX domain protein (114 aa)
   
          0.690
R2601_15527
Uncharacterized protein (475 aa)
   
          0.673
R2601_18568
Uncharacterized protein (293 aa)
   
          0.659
R2601_25066
Uncharacterized protein (190 aa)
   
          0.656
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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