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R2601_22352 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22352" - Ferredoxin--NADP reductase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22352Ferredoxin--NADP reductase (292 aa)    
Predicted Functional Partners:
R2601_22367
Sulfite reductase, putative (557 aa)
 
   
  0.784
R2601_22362
Phosphoadenylyl-sulfate reductase (thioredoxin) ; Reduction of activated sulfate into sulfite (263 aa)
         
  0.745
R2601_22357
Uncharacterized protein (127 aa)
              0.707
R2601_22432
Uncharacterized protein (118 aa)
   
 
  0.668
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
       
  0.629
R2601_06428
Rieske (2Fe-2S) region (312 aa)
 
 
  0.625
R2601_26776
Transcriptional regulator (188 aa)
 
     
  0.589
R2601_22372
Uncharacterized protein (99 aa)
 
          0.567
R2601_16962
Probable bacterial hemoglobin (141 aa)
   
 
  0.561
R2601_25676
Thioesterase family protein (142 aa)
 
   
    0.559
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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