STRINGSTRING
R2601_22357 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22357" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22357Uncharacterized protein (127 aa)    
Predicted Functional Partners:
R2601_22367
Sulfite reductase, putative (557 aa)
 
          0.973
R2601_22362
Phosphoadenylyl-sulfate reductase (thioredoxin) ; Reduction of activated sulfate into sulfite (263 aa)
 
          0.903
R2601_22372
Uncharacterized protein (99 aa)
 
          0.866
R2601_22352
Ferredoxin--NADP reductase (292 aa)
              0.707
ftsQ
Cell division protein FtsQ ; Essential cell division protein (299 aa)
   
          0.566
R2601_22007
Uncharacterized protein (433 aa)
   
          0.486
R2601_10214
Cytochrome c-type biogenesis protein CycH (412 aa)
   
          0.484
R2601_18278
Uncharacterized protein (341 aa)
   
          0.452
R2601_22377
Uroporphyrin-III C-methyltransferase (150 aa)
              0.451
R2601_19080
Uroporphyrinogen-III methylase, c-terminal half (275 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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