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trmJ protein (Pelagibaca bermudensis) - STRING interaction network
"trmJ" - tRNA Cm32/Um32 methyltransferase in Pelagibaca bermudensis
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second shell of interactors
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filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
trmJtRNA Cm32/Um32 methyltransferase ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (247 aa)    
Predicted Functional Partners:
ftsJ
rRNA (uridine-2’-O-)-methyltransferase ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (238 aa)
   
      0.755
ctaA
Cytochrome aa3-controlling protein ; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group (381 aa)
              0.741
R2601_22492
Thermostable carboxypeptidase (500 aa)
              0.707
bamD
Outer membrane protein assembly factor BamD ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (275 aa)
   
          0.654
R2601_08741
Apolipoprotein N-acyltransferase ; Transfers the fatty acyl group on membrane lipoproteins (502 aa)
   
        0.557
R2601_08646
Inositol monophosphatase family protein (260 aa)
 
        0.553
R2601_15145
Uncharacterized protein (166 aa)
   
          0.547
R2601_08581
Beta-lactamase related protein (388 aa)
 
          0.546
R2601_21547
Penicillin-binding protein 1A (845 aa)
   
          0.540
cysS
Cysteinyl-tRNA synthetase (461 aa)
            0.536
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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