STRINGSTRING
R2601_22532 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22532" - Glutaredoxin in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22532Glutaredoxin (120 aa)    
Predicted Functional Partners:
R2601_22537
BolA-like protein (80 aa)
 
 
  0.973
R2601_08031
BolA protein, truncation (85 aa)
   
 
  0.884
R2601_22417
Iron-sulfur cluster assembly accessory protein (126 aa)
 
 
  0.773
purC
SAICAR synthetase (253 aa)
   
      0.713
R2601_26076
Iron-sulfur cluster assembly family protein (107 aa)
 
 
  0.700
R2601_14890
Glutaredoxin (85 aa)
 
 
  0.685
gshB
Glutathione synthase (311 aa)
 
   
  0.645
R2601_14940
Thioredoxin (106 aa)
   
 
  0.637
ftsJ
rRNA (uridine-2’-O-)-methyltransferase ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (238 aa)
   
        0.628
gloB
Glyoxalase II ; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (251 aa)
 
        0.622
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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