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trpA protein (Pelagibaca bermudensis) - STRING interaction network
"trpA" - Tryptophan synthase alpha chain in Pelagibaca bermudensis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
trpATryptophan synthase alpha chain ; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate (263 aa)    
Predicted Functional Partners:
trpB
Tryptophan synthase beta chain ; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (408 aa)
  0.999
trpC
Indole-3-glycerol phosphate synthase (267 aa)
 
  0.999
trpF
N-(5’-phosphoribosyl)anthranilate isomerase (223 aa)
 
 
  0.996
trpD
Anthranilate phosphoribosyltransferase ; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (340 aa)
 
  0.992
R2601_24739
Anthranilate synthase component I (504 aa)
 
 
  0.990
R2601_25211
Anthranilate synthase component II (193 aa)
 
 
  0.979
R2601_20946
Para-aminobenzoate synthase component I (384 aa)
 
 
  0.968
R2601_08201
Uncharacterized protein (320 aa)
 
 
  0.941
R2601_26746
Probable threonine dehydratase protein (338 aa)
   
 
  0.841
ilvA
Threonine deaminase ; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (414 aa)
   
 
  0.841
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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