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R2601_22661 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22661" - MATE efflux family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22661MATE efflux family protein (454 aa)    
Predicted Functional Partners:
R2601_08756
PhoH family protein (326 aa)
       
      0.670
R2601_22666
GTP-binding protein YchF (169 aa)
   
      0.648
R2601_22656
Nickel/cobalt efflux system (308 aa)
              0.646
R2601_22651
Uncharacterized protein (76 aa)
              0.634
R2601_10869
Acyltransferase family protein (244 aa)
     
    0.498
R2601_06668
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (134 aa)
 
   
  0.485
R2601_12925
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (82 aa)
       
  0.473
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (822 aa)
   
        0.462
rbfA
Ribosome-binding factor A ; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (131 aa)
   
        0.462
R2601_15205
Phosphopantetheinyl transferase PptA, putative (218 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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