STRINGSTRING
R2601_22776 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22776" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22776Uncharacterized protein (142 aa)    
Predicted Functional Partners:
R2601_22781
Uncharacterized protein (100 aa)
              0.859
R2601_22786
Uncharacterized protein (205 aa)
              0.653
R2601_22771
Lysozyme (263 aa)
              0.651
R2601_22766
Uncharacterized protein (87 aa)
              0.651
R2601_22761
Uncharacterized protein (62 aa)
              0.651
R2601_22756
Uncharacterized protein (48 aa)
              0.637
R2601_22826
Uncharacterized protein (75 aa)
              0.455
R2601_22821
Phage-related tail protein (1300 aa)
              0.455
R2601_22816
Uncharacterized protein (119 aa)
              0.455
R2601_22811
Uncharacterized protein (156 aa)
              0.455
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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