STRINGSTRING
R2601_22851 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_22851" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_22851Uncharacterized protein (100 aa)    
Predicted Functional Partners:
R2601_22856
Uncharacterized protein (107 aa)
              0.859
R2601_22846
No annotation available (221 aa)
              0.859
R2601_22841
Uncharacterized protein (145 aa)
              0.859
R2601_22836
Uncharacterized protein (323 aa)
              0.859
R2601_22831
Uncharacterized protein (153 aa)
              0.859
R2601_22861
Uncharacterized protein (345 aa)
              0.653
R2601_22826
Uncharacterized protein (75 aa)
              0.617
R2601_22821
Phage-related tail protein (1300 aa)
              0.617
R2601_22816
Uncharacterized protein (119 aa)
              0.617
R2601_22811
Uncharacterized protein (156 aa)
              0.617
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]