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R2601_23118 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_23118" - 4-hydroxy-4-methyl-2-oxoglutarate aldolase, putative in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_231184-hydroxy-4-methyl-2-oxoglutarate aldolase, putative (225 aa)    
Predicted Functional Partners:
R2601_23133
C4-dicarboxylate transport system C4-dicarboxylate-binding protein (333 aa)
 
          0.876
R2601_23123
TRAP-type C4-dicarboxylate transport system, large permease component (428 aa)
 
          0.786
R2601_23128
Uncharacterized protein (187 aa)
              0.746
R2601_01713
Uncharacterized protein (241 aa)
 
          0.736
R2601_06463
Acetolactate synthase large subunit (526 aa)
 
   
    0.649
R2601_26996
ATP-dependent RNA helicase RhlE (502 aa)
     
 
  0.645
R2601_21071
ATP-dependent RNA helicase, DEAD/DEAH box family protein (727 aa)
     
 
  0.645
R2601_18163
Putative ATP-dependent RNA helicase protein (430 aa)
     
 
  0.645
R2601_08928
Helicase, putative (989 aa)
     
 
  0.645
R2601_23138
Uncharacterized protein (269 aa)
 
          0.632
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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