STRINGSTRING
R2601_23393 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_23393" - Chromate transporter in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_23393Chromate transporter (416 aa)    
Predicted Functional Partners:
R2601_23398
Uncharacterized protein (42 aa)
              0.674
R2601_23388
Uncharacterized protein (158 aa)
              0.593
R2601_23403
Uncharacterized protein (53 aa)
              0.523
moaD
Molybdopterin synthase sulfur carrier subunit ; Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin (82 aa)
 
   
    0.479
R2601_22207
Transcriptional Regulator, PadR-like family protein (180 aa)
         
  0.452
R2601_27208
Rhodanese-related sulfurtransferase (133 aa)
              0.450
R2601_25701
Rhodanese-like domain protein (120 aa)
              0.450
R2601_13264
Rhodanese family protein (124 aa)
              0.450
R2601_04973
Uncharacterized protein (179 aa)
              0.450
R2601_09952
Competence protein ComM (504 aa)
       
    0.400
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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