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R2601_23680 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_23680" - Cobalt chelatase, CobS small subunit in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_23680Cobalt chelatase, CobS small subunit (327 aa)    
Predicted Functional Partners:
R2601_23670
Cobalt chelatase, pCobT subunit (625 aa)
 
 
  0.990
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
       
  0.869
R2601_14710
Chromosome partitioning protein ParA (269 aa)
   
 
    0.794
R2601_11269
ParA family protein (224 aa)
   
 
    0.794
cobB
Hydrogenobyrinic acid a,c-diamide synthase ; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source (436 aa)
         
  0.788
R2601_26381
VWA domain containing CoxE-like family protein (416 aa)
       
    0.643
R2601_16900
Uncharacterized protein (166 aa)
   
          0.638
R2601_23690
Uncharacterized protein (232 aa)
              0.615
R2601_23685
RNA polymerase sigma-70 factor (185 aa)
              0.612
R2601_16705
Outer-membrane lipoprotein carrier protein ; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (193 aa)
   
          0.579
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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