STRINGSTRING
R2601_23745 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_23745" - Predicted glycosyltransferase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_23745Predicted glycosyltransferase (266 aa)    
Predicted Functional Partners:
R2601_13915
Uncharacterized protein (182 aa)
   
          0.696
R2601_11274
Uncharacterized protein (223 aa)
   
          0.655
R2601_23755
Uncharacterized protein (386 aa)
              0.621
R2601_23750
3-oxoacyl-[acyl-carrier-protein] synthase 2 ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (418 aa)
              0.621
R2601_14295
Putative glycosyltransferase (421 aa)
   
          0.602
R2601_26106
Glycosyl transferase, group 1 (376 aa)
 
          0.532
R2601_09827
Uncharacterized protein (219 aa)
   
          0.516
R2601_18518
Possible flagellar switch protein FliM (396 aa)
   
          0.515
R2601_08331
Uncharacterized protein (63 aa)
   
          0.495
R2601_05668
Uncharacterized protein (147 aa)
   
          0.494
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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