STRINGSTRING
R2601_23750 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_23750" - 3-oxoacyl-[acyl-carrier-protein] synthase 2 in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_237503-oxoacyl-[acyl-carrier-protein] synthase 2 ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (418 aa)    
Predicted Functional Partners:
R2601_24265
Malonyl CoA-acyl carrier protein transacylase (313 aa)
  0.999
fabH
Beta-ketoacyl-ACP synthase III ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids (323 aa)
 
 
  0.996
R2601_24270
3-oxoacyl-(Acyl-carrier-protein) reductase (245 aa)
 
  0.963
R2601_24769
Enoyl-[acyl-carrier-protein] reductase [NADH] (255 aa)
   
  0.956
R2601_20296
Enoyl-[acyl-carrier-protein] reductase [NADH] (255 aa)
   
  0.956
R2601_08816
Enoyl-[acyl-carrier-protein] reductase [NADH] (263 aa)
   
  0.956
acpP
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
 
  0.947
R2601_18448
Acetyl-CoA carboxylase (451 aa)
 
  0.944
fabZ
Beta-hydroxyacyl-ACP dehydratase ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (153 aa)
 
  0.937
accA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha ; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA (320 aa)
 
 
  0.925
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]