STRINGSTRING
R2601_23765 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_23765" - Glyoxalase family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_23765Glyoxalase family protein (126 aa)    
Predicted Functional Partners:
R2601_24844
Uncharacterized protein (332 aa)
         
    0.900
R2601_26486
Redox-sensitive transcriptional regulator-activator protein (144 aa)
 
          0.752
R2601_23760
Uncharacterized protein (302 aa)
              0.555
R2601_06288
Glyoxalase family protein (180 aa)
   
          0.507
R2601_08581
Beta-lactamase related protein (388 aa)
   
          0.505
cysS
Cysteinyl-tRNA synthetase (461 aa)
              0.490
R2601_07348
Uncharacterized protein (255 aa)
   
          0.428
R2601_23920
Uncharacterized protein (210 aa)
   
          0.417
R2601_15657
Uncharacterized protein (253 aa)
   
          0.417
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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