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mnmA protein (Pelagibaca bermudensis) - STRING interaction network
"mnmA" - tRNA-specific 2-thiouridylase MnmA in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
Experiments
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[Homology]
Score
mnmAtRNA-specific 2-thiouridylase MnmA ; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (380 aa)    
Predicted Functional Partners:
gidA
Glucose-inhibited division protein A ; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (622 aa)
 
 
  0.871
mnmE
tRNA modification GTPase MnmE ; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 (373 aa)
 
 
  0.838
lepA
Ribosomal back-translocase LepA ; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (600 aa)
 
   
  0.757
R2601_23825
Uncharacterized protein (99 aa)
              0.746
R2601_26881
Putative aminotransferase (344 aa)
 
   
  0.734
R2601_16730
Riboflavin biosynthesis protein (310 aa)
 
        0.718
trmD
tRNA [GM37] methyltransferase ; Specifically methylates guanosine-37 in various tRNAs (271 aa)
 
   
  0.676
rnc
Ribonuclease III ; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (227 aa)
 
   
  0.616
R2601_21997
Adenylosuccinase (434 aa)
   
   
  0.612
R2601_12151
MiaB-like tRNA modifying enzyme (417 aa)
   
   
  0.602
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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