STRINGSTRING
R2601_24050 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24050" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24050Uncharacterized protein (109 aa)    
Predicted Functional Partners:
R2601_24045
Uncharacterized protein (179 aa)
              0.859
R2601_24040
Uncharacterized protein (408 aa)
              0.819
R2601_24035
Uncharacterized protein (112 aa)
              0.792
R2601_24030
Putative membrane-anchored cell surface protein (613 aa)
              0.792
R2601_24060
Uncharacterized protein (142 aa)
              0.745
R2601_24055
Uncharacterized protein (100 aa)
              0.745
R2601_24070
Uncharacterized protein (96 aa)
              0.571
R2601_24065
Uncharacterized protein (265 aa)
              0.571
R2601_24075
Uncharacterized protein (124 aa)
              0.425
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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