STRINGSTRING
R2601_24190 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24190" - Cytochrome d ubiquinol oxidase, subunit II in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24190Cytochrome d ubiquinol oxidase, subunit II (338 aa)    
Predicted Functional Partners:
R2601_24185
Quinol oxidase subunit I QxtA (475 aa)
 
  0.999
R2601_26761
Cytochrome d oxidase (537 aa)
 
  0.999
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
 
   
  0.859
R2601_24195
Uncharacterized protein (34 aa)
              0.859
R2601_17167
pH adaption potassium efflux system, PhaA/B subunit (954 aa)
       
  0.841
R2601_21777
ATP synthase subunit E (382 aa)
         
  0.820
R2601_08371
Dihydrolipoamide acetyltransferase (461 aa)
         
  0.815
R2601_10769
Succinate dehydrogenase cytochrome b-556 subunit (131 aa)
     
  0.813
nuoB
NDH-1 subunit B ; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (206 aa)
     
 
  0.811
nuoN
NDH-1 subunit N ; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (480 aa)
     
 
  0.811
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]