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R2601_24245 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24245" - Replicative DNA helicase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
R2601_24245Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins (494 aa)    
Predicted Functional Partners:
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (653 aa)
 
  0.985
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (451 aa)
 
 
  0.976
priA
ATP-dependent helicase PriA ; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (729 aa)
 
  0.948
R2601_24240
Alanine racemase ; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (345 aa)
   
  0.943
R2601_17304
DNA polymerase III subunits gamma and tau (588 aa)
 
 
  0.927
R2601_27369
Putative transposase (652 aa)
     
  0.872
R2601_15835
Putative transposase (652 aa)
     
  0.872
R2601_13794
Putative transposase (755 aa)
     
  0.872
R2601_24395
Transposion helper protein, ATP-binding protein (255 aa)
     
  0.871
R2601_19794
Putative transposase (233 aa)
     
  0.871
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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