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R2601_24330 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24330" - Peptidylprolyl isomerase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_24330Peptidylprolyl isomerase (408 aa)    
Predicted Functional Partners:
lptD
LPS-assembly protein LptD ; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (727 aa)
 
   
  0.967
R2601_24340
Permease, YjgP/YjgQ family protein (364 aa)
 
 
  0.908
R2601_24345
Predicted permease (371 aa)
 
 
  0.908
R2601_24325
4-(phosphohydroxy)-L-threonine dehydrogenase ; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (320 aa)
   
   
  0.871
R2601_26316
PQQ enzyme repeat family protein (443 aa)
   
 
  0.835
pepA
Leucyl aminopeptidase ; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (491 aa)
         
  0.747
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (278 aa)
   
   
  0.744
bamA
Outer membrane protein assembly factor BamA ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (756 aa)
 
 
  0.691
R2601_24355
DNA polymerase III subunit chi (152 aa)
              0.689
R2601_16977
Uncharacterized protein (296 aa)
   
          0.678
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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