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R2601_24495 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24495" - Acetyltransferase, GNAT family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24495Acetyltransferase, GNAT family protein (188 aa)    
Predicted Functional Partners:
rpmA
50S ribosomal protein L27 (89 aa)
              0.705
R2601_22327
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (410 aa)
   
 
  0.685
R2601_05613
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (403 aa)
   
 
  0.685
R2601_16475
GCN5-related N-acetyltransferase (158 aa)
 
 
  0.675
rplU
50S ribosomal protein L21 ; This protein binds to 23S rRNA in the presence of protein L20 (192 aa)
              0.618
rpsD
30S ribosomal protein S4 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (206 aa)
   
      0.605
R2601_09008
Ribosomal-protein-alanine acetyltransferase, putative (194 aa)
   
          0.552
R2601_10374
SlyX protein, putative (68 aa)
   
          0.535
R2601_22422
Transferase hexapeptide repeat protein (187 aa)
       
    0.524
R2601_08111
Chloramphenicol acetyltransferase, putative (203 aa)
       
    0.524
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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