STRINGSTRING
R2601_24589 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24589" - Putative 4-alpha-glucanotransferase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24589Putative 4-alpha-glucanotransferase (199 aa)    
Predicted Functional Partners:
R2601_24594
Putative 4-alpha-glucanotransferase (413 aa)
          0.996
R2601_24599
Glycogen operon protein GlgX homolog (680 aa)
 
  0.988
R2601_05418
Putative hydrolase (727 aa)
 
  0.987
R2601_24614
1,4-alpha-glucan branching enzyme (682 aa)
 
  0.980
R2601_05413
Putative hydrolase (460 aa)
 
  0.974
R2601_04753
Glycogen operon protein GlgX homolog (694 aa)
 
  0.961
R2601_24619
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (794 aa)
 
 
  0.898
R2601_24584
Phosphoglucomutase (544 aa)
   
   
  0.881
glgC
ADP-glucose synthase ; Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (409 aa)
 
   
  0.813
R2601_24579
Uncharacterized protein (292 aa)
   
        0.805
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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