STRINGSTRING
R2601_24634 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24634" - Putative transcription regulator protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24634Putative transcription regulator protein (356 aa)    
Predicted Functional Partners:
R2601_24629
Beta-glucosidase (443 aa)
 
     
  0.934
R2601_24654
Probable alpha-glucosidase protein (551 aa)
 
   
  0.891
R2601_24624
Putative glucokinase (327 aa)
 
     
  0.876
R2601_16932
Putative Fructokinase (299 aa)
 
 
  0.852
R2601_24639
ABC alpha-glucoside transporter, perplasmic substrate-binding protein (454 aa)
 
     
  0.844
R2601_24644
ABC alpha-glucoside transporter, inner membrane subunit AglF (324 aa)
 
     
  0.828
R2601_24649
ABC alpha-glucoside transporter, inner membrane subunit AglG (418 aa)
 
     
  0.826
R2601_16860
Phosphocarrier protein HPr (92 aa)
     
 
  0.750
R2601_24974
Kinase, pfkB family protein (297 aa)
 
 
  0.746
R2601_20496
Putative sugar kinase protein (264 aa)
 
 
  0.733
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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