STRINGSTRING
R2601_24669 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24669" - Xanthine/uracil permease family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24669Xanthine/uracil permease family protein (268 aa)    
Predicted Functional Partners:
R2601_24664
Xanthine/uracil permease family protein (188 aa)
 
          0.976
pyrB
Aspartate transcarbamylase (316 aa)
   
   
  0.755
carA
Carbamoyl-phosphate synthetase glutamine chain (379 aa)
   
   
  0.722
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
   
  0.704
R2601_13925
Dihydroorotase (427 aa)
   
   
  0.694
R2601_11809
Dihydropyrimidinase (484 aa)
   
   
  0.694
R2601_00595
Dihydropyrimidinase (469 aa)
   
   
  0.694
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
   
   
  0.671
R2601_16485
Cytosine deaminase (429 aa)
   
   
  0.668
R2601_00530
Uncharacterized protein (407 aa)
   
   
  0.668
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (10%) [HD]