STRINGSTRING
R2601_24784 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24784" - Uncharacterized protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24784Uncharacterized protein (158 aa)    
Predicted Functional Partners:
R2601_24779
Cold shock DNA-binding domain protein (180 aa)
              0.887
pdxH
Pyridoxal 5’-phosphate synthase ; Catalyzes the oxidation of either pyridoxine 5’- phosphate (PNP) or pyridoxamine 5’-phosphate (PMP) into pyridoxal 5’-phosphate (PLP) (201 aa)
              0.736
cysS
Cysteinyl-tRNA synthetase (461 aa)
              0.451
R2601_17978
NADH-ubiquinone oxidoreductase family protein (103 aa)
              0.451
R2601_09245
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (295 aa)
              0.451
R2601_07128
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (306 aa)
              0.451
gpt
Xanthine-guanine phosphoribosyltransferase ; Acts on guanine, xanthine and to a lesser extent hypoxanthine (174 aa)
              0.445
R2601_24769
Enoyl-[acyl-carrier-protein] reductase [NADH] (255 aa)
              0.443
R2601_17242
Putative membrane protein insertion efficiency factor ; Could be involved in insertion of integral membrane proteins into the membrane (69 aa)
              0.435
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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