STRINGSTRING
R2601_24809 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24809" - DNA-binding protein, putative in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24809DNA-binding protein, putative (206 aa)    
Predicted Functional Partners:
R2601_14360
NAD(+) synthase (552 aa)
       
  0.824
R2601_24804
Benzoate-coenzyme A ligase, putative (503 aa)
              0.755
R2601_05983
HipA protein (439 aa)
     
 
  0.736
R2601_14175
Dihydrolipoamide dehydrogenase (466 aa)
 
   
  0.541
R2601_20641
Acyl-CoA synthase (528 aa)
 
     
  0.537
atpH
F-type ATPase subunit delta ; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (186 aa)
       
      0.499
R2601_17329
Hydrolase, NUDIX family protein (319 aa)
   
   
    0.497
R2601_21887
DNA binding protein, putative (189 aa)
   
          0.497
R2601_13579
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (206 aa)
   
   
  0.494
R2601_09083
Uncharacterized protein (165 aa)
   
          0.467
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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