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R2601_24899 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_24899" - Bacterial transferase family protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_24899Bacterial transferase family protein (173 aa)    
Predicted Functional Partners:
gmk
GMP kinase ; Essential for recycling GMP and indirectly, cGMP (213 aa)
   
        0.889
R2601_24889
Uncharacterized protein (296 aa)
              0.887
R2601_13669
Carbonate dehydratase ; Reversible hydration of carbon dioxide (215 aa)
     
 
  0.724
R2601_20586
Putative ribulose bisphosphate carboxylaseoxygenase,large subunit (421 aa)
       
 
  0.623
R2601_17389
Ribulose-bisphosphate carboxylase form I large subunit CbbL (487 aa)
       
 
  0.623
R2601_01115
Ribulose bisphosphate carboxylaseoxygenase, large subunit protein (421 aa)
       
 
  0.623
R2601_21777
ATP synthase subunit E (382 aa)
   
    0.610
R2601_17157
ATP synthase subunit E (155 aa)
   
    0.610
R2601_17384
Ribulose-bisphosphate carboxylase small chain (139 aa)
       
 
  0.607
R2601_17369
Uncharacterized protein (184 aa)
     
      0.509
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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