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R2601_25126 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25126" - Transcriptional regulator, AraC family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
R2601_25126Transcriptional regulator, AraC family protein (256 aa)    
Predicted Functional Partners:
miaA
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (304 aa)
              0.741
R2601_18668
Putative sarcosine dehydrogenase protein (853 aa)
       
      0.734
R2601_25131
Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein (561 aa)
              0.623
R2601_16845
Uncharacterized protein (271 aa)
   
          0.603
R2601_21817
Uncharacterized protein (133 aa)
   
          0.569
R2601_25116
Uridylate kinase ; Catalyzes the reversible phosphorylation of UMP to UDP (241 aa)
              0.564
R2601_26346
Uncharacterized protein (338 aa)
   
          0.520
R2601_19614
Lipoprotein, putative (312 aa)
   
          0.512
R2601_13109
4-hydroxybenzoate 3-monooxygenase (392 aa)
 
     
  0.511
R2601_10479
Uncharacterized protein (249 aa)
   
          0.492
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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