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R2601_25186 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25186" - Radical SAM domain protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25186Radical SAM domain protein (361 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (343 aa)
         
    0.977
R2601_25191
Corrinoid methyltransferase protein, putative (234 aa)
       
    0.719
R2601_14120
Protein translocase subunit SecA ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (915 aa)
       
      0.535
R2601_02788
Protein translocase subunit SecA ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (671 aa)
       
      0.535
R2601_25841
Uncharacterized protein (223 aa)
 
          0.525
R2601_12248
RNA polymerase sigma-70 factor (181 aa)
   
          0.472
R2601_21902
Transcriptional regulatory protein (150 aa)
              0.451
R2601_13419
Transcriptional regulatory protein (139 aa)
              0.451
R2601_13159
Putative transcription regulator protein (158 aa)
              0.451
R2601_13154
Transcriptional regulatory protein (166 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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