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R2601_25256 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25256" - Citrate synthase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25256Citrate synthase (432 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase ; Catalyzes the reversible oxidation of malate to oxaloacetate (320 aa)
   
  0.999
R2601_21972
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (923 aa)
 
  0.998
acsA
Acyl-activating enzyme ; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (656 aa)
   
  0.995
R2601_22706
Aconitate hydratase (929 aa)
   
 
  0.992
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
 
  0.986
sucC
Succinyl-CoA synthetase subunit beta (397 aa)
   
  0.981
R2601_08371
Dihydrolipoamide acetyltransferase (461 aa)
   
  0.974
R2601_08381
Acetyltransferase component of pyruvate dehydrogenase complex ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (446 aa)
   
  0.965
R2601_10829
2-oxoglutarate dehydrogenase, E1 component (990 aa)
   
   
  0.963
R2601_14750
NADP-dependent malic enzyme (751 aa)
   
 
  0.951
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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