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R2601_25351 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25351" - Mechanosensitive ion channel family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25351Mechanosensitive ion channel family protein (422 aa)    
Predicted Functional Partners:
R2601_25356
Mechanosensitive ion channel family protein (419 aa)
          0.981
R2601_25361
O-acetylserine (Thiol)-lyase, cysteine synthase (342 aa)
              0.897
R2601_25346
Uncharacterized protein (238 aa)
              0.881
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (822 aa)
       
      0.801
R2601_26266
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (327 aa)
       
      0.743
R2601_25366
Tellurite resistance protein (375 aa)
              0.725
dusA
tRNA-dihydrouridine synthase A ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (315 aa)
       
      0.688
R2601_25371
Tellurite resistance protein (134 aa)
              0.679
R2601_21447
Nodulation protein (453 aa)
     
      0.588
R2601_21251
Nodulation protein T (377 aa)
     
      0.588
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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