STRINGSTRING
R2601_25376 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25376" - Deoxyribodipyrimidine photolyase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25376Deoxyribodipyrimidine photolyase (473 aa)    
Predicted Functional Partners:
R2601_12201
Deoxyribodipyrimidine photolyase-related protein (510 aa)
 
     
  0.740
R2601_25361
O-acetylserine (Thiol)-lyase, cysteine synthase (342 aa)
     
      0.719
R2601_25381
Aminotransferase, class V (399 aa)
   
        0.690
R2601_12231
Putative cyclopropane/cyclopropene fatty acid synthesis protein (262 aa)
 
        0.676
R2601_25371
Tellurite resistance protein (134 aa)
 
          0.658
R2601_12243
FAD dependent oxidoreductase (304 aa)
 
        0.644
R2601_13789
NADH ubiquinone oxidoreductase, putative (327 aa)
 
      0.582
R2601_25366
Tellurite resistance protein (375 aa)
   
        0.579
ung
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (218 aa)
     
 
  0.577
R2601_12226
Cyclopropane-fatty-acyl-phospholipid synthase (390 aa)
 
        0.542
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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