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R2601_25406 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25406" - Transcriptional regulator, GntR family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25406Transcriptional regulator, GntR family protein (249 aa)    
Predicted Functional Partners:
R2601_05778
Transcriptional regulator, GntR family protein (241 aa)
   
          0.757
R2601_00255
FAD linked oxidase (946 aa)
   
 
  0.733
R2601_14750
NADP-dependent malic enzyme (751 aa)
       
    0.653
R2601_10082
Malic enzyme (759 aa)
       
    0.653
R2601_25401
DinB family protein (171 aa)
              0.653
R2601_23640
Putative D-lactate dehydrogenase (Cytochrome), FAD/FMN-containing oxidoreductase (457 aa)
   
 
    0.626
R2601_22686
FAD/FMN-containing dehydrogenase (457 aa)
   
 
    0.626
R2601_15607
Glycolate oxidase, GlcD subunit (480 aa)
   
 
    0.626
R2601_15602
Glycolate oxidase, GlcE subunit (370 aa)
   
 
    0.626
R2601_09018
Oxidoreductase, FAD-binding protein (471 aa)
   
 
    0.626
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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