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metA protein (Pelagibaca bermudensis) - STRING interaction network
"metA" - Homoserine O-transsuccinylase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
metAHomoserine O-transsuccinylase (317 aa)    
Predicted Functional Partners:
R2601_08903
O-succinylhomoserine sulfhydrylase (392 aa)
 
 
  0.996
R2601_27181
O-acetylhomoserine aminocarboxypropyltransferase (425 aa)
 
 
  0.995
R2601_17719
Homoserine dehydrogenase (428 aa)
   
 
  0.989
R2601_25626
Predicted hydrolase or acyltransferase (Alpha/beta hydrolase) (316 aa)
              0.887
glyA
Serine hydroxymethyltransferase ; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (431 aa)
         
  0.812
R2601_26746
Probable threonine dehydratase protein (338 aa)
         
  0.810
ilvA
Threonine deaminase ; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (414 aa)
         
  0.810
R2601_11034
Threonine dehydratase (323 aa)
         
  0.810
R2601_01360
Pyridoxal-phosphate dependent enzyme (321 aa)
         
  0.810
R2601_25361
O-acetylserine (Thiol)-lyase, cysteine synthase (342 aa)
       
  0.808
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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