STRINGSTRING
R2601_25721 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25721" - Probable oxidoreductase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25721Probable oxidoreductase (938 aa)    
Predicted Functional Partners:
R2601_25716
Ferredoxin (173 aa)
 
  0.993
R2601_21952
Xanthine dehydrogenase family protein, medium subunit (282 aa)
  0.958
R2601_03783
Xanthine dehydrogenase family protein, small subunit (159 aa)
 
  0.955
R2601_01230
Putative oxidoreductase protein (166 aa)
 
  0.954
R2601_26431
Putative carbon-monoxide dehydrogenase small chain (161 aa)
 
  0.950
R2601_03793
Carbon-monoxide dehydrogenase medium chain (316 aa)
 
  0.946
R2601_19844
Putative oxidoreductase (148 aa)
 
  0.942
R2601_08521
Isoquinoline 1-oxidoreductase, alpha subunit (152 aa)
 
  0.939
R2601_02303
Probable oxidoreductase (213 aa)
 
  0.939
R2601_01235
Probable carbon monoxide dehydrogenase medium chain (277 aa)
 
  0.903
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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