STRINGSTRING
R2601_25791 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25791" - Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25791Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase (733 aa)    
Predicted Functional Partners:
R2601_25786
Acetyl-CoA acetyltransferase (403 aa)
  0.999
R2601_04023
Acetyl-CoA acetyltransferase (325 aa)
 
  0.998
R2601_25771
Acyl-CoA dehydrogenase family protein (593 aa)
 
 
  0.996
R2601_23595
Glutaryl-CoA dehydrogenase (406 aa)
 
 
  0.995
R2601_00015
Acyl-CoA dehydrogenase (380 aa)
 
  0.995
R2601_00540
Acyl-CoA dehydrogenase (386 aa)
 
  0.995
R2601_13860
Acyl-CoA dehydrogenase family protein (566 aa)
 
 
  0.994
R2601_26111
Acyl-CoA dehydrogenase (379 aa)
   
  0.994
R2601_20034
Acyl-CoA dehydrogenase (384 aa)
   
  0.994
R2601_12835
Isobutyryl-CoA dehydrogenase (562 aa)
   
  0.994
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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