STRINGSTRING
R2601_25931 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25931" - MOFRL in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25931MOFRL (423 aa)    
Predicted Functional Partners:
R2601_26201
6-phosphogluconate dehydrogenase domain protein (289 aa)
 
   
  0.908
R2601_22676
Hydroxypyruvate isomerase ; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (261 aa)
 
 
  0.906
R2601_15150
2-hydroxyacid dehydrogenase (328 aa)
 
 
  0.895
R2601_16765
Pyruvate kinase (478 aa)
 
 
  0.866
R2601_00255
FAD linked oxidase (946 aa)
   
 
    0.824
R2601_01818
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein (318 aa)
   
 
  0.823
R2601_12540
Beta subunit of citrate lyase (319 aa)
       
  0.822
R2601_17664
Serine--glyoxylate transaminase, putative (399 aa)
   
 
  0.819
ureA
Urea amidohydrolase subunit gamma (100 aa)
           
  0.819
R2601_16922
D-isomer specific 2-hydroxyacid dehydrogenase family protein (319 aa)
 
 
  0.815
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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