STRINGSTRING
R2601_25956 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25956" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25956Uncharacterized protein (70 aa)    
Predicted Functional Partners:
R2601_25961
Uncharacterized protein (273 aa)
          0.982
R2601_25976
Methyltransferase, FkbM family protein (231 aa)
 
          0.957
R2601_25971
Uncharacterized protein (787 aa)
 
       
0.878
R2601_25981
Glycosyl transferase, group 2 family protein (350 aa)
 
       
0.870
R2601_25966
Uncharacterized protein (211 aa)
              0.866
R2601_25986
Uncharacterized protein (322 aa)
 
          0.818
R2601_13229
Uncharacterized protein (257 aa)
   
          0.773
R2601_13224
Uncharacterized protein (124 aa)
   
          0.765
R2601_12298
Uncharacterized protein (272 aa)
   
          0.755
R2601_26346
Uncharacterized protein (338 aa)
   
          0.751
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (10%) [HD]