STRINGSTRING
R2601_25986 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_25986" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_25986Uncharacterized protein (322 aa)    
Predicted Functional Partners:
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
         
    0.900
R2601_09205
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (105 aa)
         
    0.900
R2601_25981
Glycosyl transferase, group 2 family protein (350 aa)
          0.866
R2601_25961
Uncharacterized protein (273 aa)
          0.836
R2601_25956
Uncharacterized protein (70 aa)
 
          0.818
R2601_25971
Uncharacterized protein (787 aa)
          0.788
R2601_18960
Uncharacterized protein (132 aa)
   
          0.776
R2601_08761
Lipoprotein, putative (101 aa)
   
          0.774
R2601_26346
Uncharacterized protein (338 aa)
   
          0.765
R2601_08311
Lipoprotein, putative (177 aa)
   
          0.751
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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