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R2601_26196 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26196" - Osmotically inducible protein OsmC in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26196Osmotically inducible protein OsmC (141 aa)    
Predicted Functional Partners:
R2601_24864
Glucosyl-glycerol-phosphate synthase (504 aa)
   
   
  0.545
R2601_10924
Probable transcriptional regulator protein, MarR family (145 aa)
         
  0.515
R2601_21016
Uncharacterized protein (161 aa)
   
   
  0.508
R2601_08561
LysM domain protein (429 aa)
     
        0.457
R2601_04763
Glucose dehydrogenase (741 aa)
   
          0.444
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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