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R2601_26286 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26286" - Aromatic-rich family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26286Aromatic-rich family protein (151 aa)    
Predicted Functional Partners:
lipA
Sulfur insertion protein LipA ; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (316 aa)
   
   
  0.906
acpP
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
           
  0.821
R2601_11861
Acetoacetyl-CoA reductase (240 aa)
           
  0.821
rpoD
Sigma-70 ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (661 aa)
           
  0.821
ubiG
3-demethylubiquinone 3-O-methyltransferase ; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway (250 aa)
   
   
  0.780
R2601_26291
Hypoxanthine phosphoribosyltransferase (180 aa)
              0.729
R2601_26296
Uncharacterized protein (61 aa)
              0.654
ubiE
Demethylmenaquinone methyltransferase ; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) (250 aa)
   
   
  0.643
ubiA
4-HB polyprenyltransferase ; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate (343 aa)
   
 
  0.640
R2601_09532
Uncharacterized protein (237 aa)
   
        0.578
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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