STRINGSTRING
R2601_26396 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26396" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26396Uncharacterized protein (155 aa)    
Predicted Functional Partners:
R2601_09922
Peptidyl-dipeptidase, putative (673 aa)
 
            0.687
R2601_26391
Glutamate-ammonia-ligase adenylyltransferase ; Adenylation and deadenylation of glutamate--ammonia ligase (937 aa)
              0.673
R2601_26386
Uncharacterized protein (87 aa)
              0.650
R2601_26401
SREBP protease/CBS domain (354 aa)
              0.645
R2601_26381
VWA domain containing CoxE-like family protein (416 aa)
 
          0.547
R2601_15407
Uncharacterized protein (105 aa)
   
          0.472
R2601_12640
Uncharacterized protein (404 aa)
 
          0.404
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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