STRINGSTRING
R2601_26411 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26411" - ALKANAL MONOOXYGENASE ALPHA CHAIN in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26411ALKANAL MONOOXYGENASE ALPHA CHAIN (332 aa)    
Predicted Functional Partners:
R2601_25741
NADPH-dependent FMN reductase (181 aa)
   
  0.836
R2601_24529
NAD(P)H dehydrogenase (Quinone)-NADPH-dependent FMN reductase (187 aa)
   
  0.836
R2601_11514
Uncharacterized protein (188 aa)
   
  0.836
R2601_02623
NADPH-dependent FMN reductase (237 aa)
   
  0.836
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
       
  0.815
R2601_26406
Methyl-accepting chemotaxis protein McpH (455 aa)
         
  0.628
R2601_16630
2,4-dienoyl-CoA reductase (669 aa)
       
    0.589
R2601_01613
2,4-dienoyl-CoA reductase (NADPH) protein (678 aa)
       
    0.589
R2601_13749
Nitroreductase family protein (192 aa)
   
 
  0.583
R2601_26416
Carbon monoxide dehydrogenase, medium subunit, putative (262 aa)
              0.569
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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