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R2601_26546 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26546" - Mannitol dehydrogenase in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26546Mannitol dehydrogenase (497 aa)    
Predicted Functional Partners:
uxuA
D-mannonate hydro-lyase ; Catalyzes the dehydration of D-mannonate (404 aa)
 
 
  0.967
R2601_26541
Sorbitol dehydrogenase (261 aa)
   
  0.958
R2601_26531
Probable sorbitol/mannitol transport inner membrane protein (276 aa)
 
        0.952
R2601_26526
ABC sorbitol/mannitol transporter, inner membrane subunit (276 aa)
 
        0.937
R2601_22252
Altronate hydrolase (498 aa)
 
   
  0.922
R2601_26536
ABC sorbitol/mannitol transporter, ATPase subunit (333 aa)
          0.904
R2601_17097
Xylulokinase (483 aa)
 
  0.894
R2601_16932
Putative Fructokinase (299 aa)
       
  0.890
R2601_03208
Uncharacterized protein (378 aa)
 
 
    0.889
R2601_22242
Putative Zn-dependent dehydrogenase (334 aa)
       
  0.820
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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