STRINGSTRING
R2601_26581 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26581" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26581Uncharacterized protein (53 aa)    
Predicted Functional Partners:
R2601_26586
Uncharacterized protein (49 aa)
              0.859
R2601_26571
Probable bacterioferritin-associated ferredoxin (92 aa)
 
          0.714
R2601_26551
Uncharacterized protein (357 aa)
 
          0.692
R2601_18508
Uncharacterized protein (101 aa)
   
          0.687
R2601_25611
Outer membrane transporter, OMPP1/FadL/TodX family protein (384 aa)
   
          0.675
R2601_26576
Lipoprotein, putative (419 aa)
              0.671
R2601_26566
Ferroxidase ; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (161 aa)
              0.642
R2601_26561
Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites (514 aa)
              0.642
R2601_26556
Hypothetical signal peptide protein (327 aa)
              0.642
R2601_09792
Antibiotic biosynthesis monooxygenase domain protein (116 aa)
   
          0.631
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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