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R2601_26601 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26601" - Glutamine amidotransferase-like protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26601Glutamine amidotransferase-like protein (244 aa)    
Predicted Functional Partners:
R2601_26606
Uncharacterized protein (323 aa)
 
          0.978
R2601_05623
Glutamine synthetase family protein (453 aa)
 
 
  0.902
R2601_05633
Probable glutamine synthetase (447 aa)
 
 
  0.887
R2601_26611
Periplasmic sensor signal transduction histidine kinase (594 aa)
              0.859
R2601_16160
Glutamine synthetase (477 aa)
   
 
  0.854
R2601_24724
Glutamine synthetase (468 aa)
   
 
  0.834
R2601_07941
Glutamine synthetase III (438 aa)
   
 
  0.834
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
   
 
  0.828
R2601_12990
Glutamate synthase, large subunit (1537 aa)
       
    0.816
R2601_01933
Peptidase, M19 family protein (322 aa)
          0.815
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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